BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026C08SP1|AL428521
(686 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1713 1237 0.0
>3x_Contig1713
Length = 18539
Score = 1237 bits (611), Expect = 0.0
Identities = 658/687 (95%), Gaps = 1/687 (0%)
Strand = Plus / Minus
Query: 1 atcacatttccatcagaattattcaccgctctctcgtaccacttatcgttatcatacgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2147 atcacatttccatcagaattattcaccgctctctcgtaccacttatcgttatcatacgaa 2088
Query: 61 tccctatcgtaactaaacaacctctctccgatctctccctcagcaagccgtaacttatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2087 tccctatcgtaactaaacaacctctctccgatctctccctcagcaagccgtaacttatct 2028
Query: 121 ctcgggratgcattatggaataagaactcacagtcgactttgttctctttcaacgatagt 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2027 ctcgggaatgcattatggaataagaactcacagtcgactttgttctctttcaacgatagt 1968
Query: 181 aacttattgtaatcgtgagaatctatccagtcgtaccatgcaaacgggrtcttatcatcc 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1967 aacttattgtaatcgtgagaatctatccagtcgtaccatgcaaacgggatcttatcatcc 1908
Query: 241 gacttttcgtttccctgcatcaaatcgtatgcvagcactgaccattccaatcaggggkct 300
|||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||
Sbjct: 1907 gacttttcgtttccctgcatcaaatcgtatgcaagcactgaccattccaatctggggtct 1848
Query: 301 gartcgtaaaacttcacgtctttkacttgakcccagtactcccctttgtttgakccgtat 360
|| |||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||
Sbjct: 1847 gaatcgtaaaacttcacgtcttttacttgatcccagtactcccctttgtttgatccgtat 1788
Query: 361 ttgakcttgaagaratcctcctgcagatcatactccgta-gatactcaagcgaagtgtca 419
|||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1787 ttgatcttgaagaaatcctcctgcagatcatactccgtaggatactcaagcgaagtgtca 1728
Query: 420 tacttgarcttttcatagaaccgrataacatccggkgragagttggccttgarcgcrtcg 479
||||||| ||||||||||||||| ||||||||||| | |||||||||||||| ||| |||
Sbjct: 1727 tacttgaacttttcatagaaccgaataacatccggtgaagagttggccttgaacgcatcg 1668
Query: 480 gtatttgcstttgasgtatcgctgatacgtcgatagctcagatagtcaaactcatccgta 539
||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1667 atatttgcctttgacgtatcgctgatacgtcgatagctcagatagtcaaactcatccgta 1608
Query: 540 taagatgggactratagctggtgaagtrctatgacagtaacaaatgctaaaagaacatgg 599
||| |||| ||| ||||||||| |||| |||| |||||||||||||||||||||||||||
Sbjct: 1607 taaaatggaactaatagctggtaaagtactataacagtaacaaatgctaaaagaacatgg 1548
Query: 600 ataaaccgtttctttctaggtatwtgcaccagactcccgctcatggtgcatgtaaaamta 659
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 1547 ataaaccgtttctttctaggtatatgcaccagactcccgctcatggtgcatgtaaaacta 1488
Query: 660 atctatctggctcttgctggtatcttt 686
|||||||||||||||||||||||||||
Sbjct: 1487 atctatctggctcttgctggtatcttt 1461
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2490
Number of Sequences: 1807
Number of extensions: 2490
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 686
length of database: 10,358,551
effective HSP length: 16
effective length of query: 670
effective length of database: 10,329,639
effective search space: 6920858130
effective search space used: 6920858130
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.7 bits)